Annotating Cell Subpopulations in Integrated Object

9 Samples - 5 Benign, 4 tumor

Benign - HT771S1, HT781, HT817, HT849, HT898

Tumor - HT814, HT832, HT891, HT913

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Code/ Figures for Annotation Process

Club Cells are a Transition State Between Basal and Luminal

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inlcude tumor

inlcude tumor

Club Cells are clearly a transition between Basal and Luminal

Code for Cytotrace/Monocle3 Analysis

IL7 Pathway Interacts with Club Cells

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Code for Cell Chat/Correlation Analysis

Xenium Images Confirm The T-Cell → Club Interaction Via IL7 Pathway

Key

HT913U61

HT913U61

HT913U61

HT913U61

HT891U104

HT891U104

HT891U104

HT891U104

UMAPs of All Individual Samples